Return Fields Reference
UniProtMapper supports a wide range of return fields from UniProt. These fields are organized by their types and can be used to specify data you want to get for the proteins retrieved by your query.
UniProt return fields are organized into the categories:
Names & Taxonomy: Basic identification and taxonomic information. E.g.:: Gene names, organism details, etc.
Sequences: Sequence-related information. E.g.:: Length, mass, variants, etc.
Function: Functional annotations. E.g.:: Activity, pathways, binding sites, etc.
Structure: Structural information. E.g.:: 3D structure, secondary structure elements, etc.
Cross-references: Links to external databases, subdivided into different categories according to the database being cross-referenced. E.g.: Chemistry for datasets like DrugBank, Genome annotation for Ensembl, etc.
Supported fields
The supported return fields are listed below. The columns contain different information about the fields:
label: The label used by UniProt to represent this field. Also used as column names on the pd.DataFrame returned from get methods implemented on both APIs.
returned_field: Name used to specify which information to retrieve by the APIs. For examples, check below.
field_type: The category of the field, as listed above under Field Categories. Note that for type==’cross_reference’, the field_type is the category of the cross-referenced database.
has_full_version: Not available for type==’uniprot_field’. If yes, a “full” version of the return field is accessible by using
<field_name>_full.type: Either “uniprot_field” or “cross_reference”. The former indicates a field that is directly related to the protein, while the latter indicates a field that is a cross-reference to another database and not native to UniProt.
For more up-to-date information on has_full_version of cross-referenced fields, check the official UniProt documentation: Return Fields. In case of discrepancies, issues or pull requests are welcome!
label |
returned_field |
field_type |
has_full_version |
type |
|---|---|---|---|---|
Entry |
accession |
Names & Taxonomy |
uniprot_field |
|
Entry Name |
id |
Names & Taxonomy |
uniprot_field |
|
Gene Names |
gene_names |
Names & Taxonomy |
uniprot_field |
|
Gene Names (primary) |
gene_primary |
Names & Taxonomy |
uniprot_field |
|
Gene Names (synonym) |
gene_synonym |
Names & Taxonomy |
uniprot_field |
|
Gene Names (ordered locus) |
gene_oln |
Names & Taxonomy |
uniprot_field |
|
Gene Names (ORF) |
gene_orf |
Names & Taxonomy |
uniprot_field |
|
Organism |
organism_name |
Names & Taxonomy |
uniprot_field |
|
Organism (ID) |
organism_id |
Names & Taxonomy |
uniprot_field |
|
Protein names |
protein_name |
Names & Taxonomy |
uniprot_field |
|
Proteomes |
xref_proteomes |
Names & Taxonomy |
uniprot_field |
|
Taxonomic lineage |
lineage |
Names & Taxonomy |
uniprot_field |
|
Taxonomic lineage (IDs) |
lineage_ids |
Names & Taxonomy |
uniprot_field |
|
Virus hosts |
virus_hosts |
Names & Taxonomy |
uniprot_field |
|
Alternative products |
cc_alternative_products |
Sequences |
uniprot_field |
|
Alternative sequence |
ft_var_seq |
Sequences |
uniprot_field |
|
Erroneous gene model prediction |
error_gmodel_pred |
Sequences |
uniprot_field |
|
Fragment |
fragment |
Sequences |
uniprot_field |
|
Gene encoded by |
organelle |
Sequences |
uniprot_field |
|
Length |
length |
Sequences |
uniprot_field |
|
Mass |
mass |
Sequences |
uniprot_field |
|
Mass spectrometry |
cc_mass_spectrometry |
Sequences |
uniprot_field |
|
Natural variant |
ft_variant |
Sequences |
uniprot_field |
|
Non-adjacent residues |
ft_non_cons |
Sequences |
uniprot_field |
|
Non-standard residue |
ft_non_std |
Sequences |
uniprot_field |
|
Non-terminal residue |
ft_non_ter |
Sequences |
uniprot_field |
|
Polymorphism |
cc_polymorphism |
Sequences |
uniprot_field |
|
RNA editing |
cc_rna_editing |
Sequences |
uniprot_field |
|
Sequence |
sequence |
Sequences |
uniprot_field |
|
Sequence caution |
cc_sequence_caution |
Sequences |
uniprot_field |
|
Sequence conflict |
ft_conflict |
Sequences |
uniprot_field |
|
Sequence uncertainty |
ft_unsure |
Sequences |
uniprot_field |
|
Sequence version |
sequence_version |
Sequences |
uniprot_field |
|
Absorption |
absorption |
Function |
uniprot_field |
|
Active site |
ft_act_site |
Function |
uniprot_field |
|
Activity regulation |
cc_activity_regulation |
Function |
uniprot_field |
|
Binding site |
ft_binding |
Function |
uniprot_field |
|
Catalytic activity |
cc_catalytic_activity |
Function |
uniprot_field |
|
Cofactor |
cc_cofactor |
Function |
uniprot_field |
|
DNA binding |
ft_dna_bind |
Function |
uniprot_field |
|
EC number |
ec |
Function |
uniprot_field |
|
Function [CC] |
cc_function |
Function |
uniprot_field |
|
Kinetics |
kinetics |
Function |
uniprot_field |
|
Pathway |
cc_pathway |
Function |
uniprot_field |
|
pH dependence |
ph_dependence |
Function |
uniprot_field |
|
Redox potential |
redox_potential |
Function |
uniprot_field |
|
Rhea ID |
rhea |
Function |
uniprot_field |
|
Site |
ft_site |
Function |
uniprot_field |
|
Temperature dependence |
temp_dependence |
Function |
uniprot_field |
|
Annotation |
annotation_score |
Miscellaneous |
uniprot_field |
|
Caution |
cc_caution |
Miscellaneous |
uniprot_field |
|
Comment Count |
comment_count |
Miscellaneous |
uniprot_field |
|
Features |
feature_count |
Miscellaneous |
uniprot_field |
|
Keyword ID |
keywordid |
Miscellaneous |
uniprot_field |
|
Keywords |
keyword |
Miscellaneous |
uniprot_field |
|
Miscellaneous [CC] |
cc_miscellaneous |
Miscellaneous |
uniprot_field |
|
Protein existence |
protein_existence |
Miscellaneous |
uniprot_field |
|
Reviewed |
reviewed |
Miscellaneous |
uniprot_field |
|
Tools |
tools |
Miscellaneous |
uniprot_field |
|
UniParc |
uniparc_id |
Miscellaneous |
uniprot_field |
|
Interacts with |
cc_interaction |
Interaction |
uniprot_field |
|
Subunit structure [CC] |
cc_subunit |
Interaction |
uniprot_field |
|
Developmental stage |
cc_developmental_stage |
Expression |
uniprot_field |
|
Induction |
cc_induction |
Expression |
uniprot_field |
|
Tissue specificity |
cc_tissue_specificity |
Expression |
uniprot_field |
|
Gene Ontology (biological process) |
go_p |
Gene Ontology (GO) |
uniprot_field |
|
Gene Ontology (cellular component) |
go_c |
Gene Ontology (GO) |
uniprot_field |
|
Gene Ontology (GO) |
go |
Gene Ontology (GO) |
uniprot_field |
|
Gene Ontology (molecular function) |
go_f |
Gene Ontology (GO) |
uniprot_field |
|
Gene Ontology IDs |
go_id |
Gene Ontology (GO) |
uniprot_field |
|
Allergenic properties |
cc_allergen |
Pathology & Biotech |
uniprot_field |
|
Biotechnological use |
cc_biotechnology |
Pathology & Biotech |
uniprot_field |
|
Disruption phenotype |
cc_disruption_phenotype |
Pathology & Biotech |
uniprot_field |
|
Involvement in disease |
cc_disease |
Pathology & Biotech |
uniprot_field |
|
Mutagenesis |
ft_mutagen |
Pathology & Biotech |
uniprot_field |
|
Pharmaceutical use |
cc_pharmaceutical |
Pathology & Biotech |
uniprot_field |
|
Toxic dose |
cc_toxic_dose |
Pathology & Biotech |
uniprot_field |
|
Intramembrane |
ft_intramem |
Subcellular location |
uniprot_field |
|
Subcellular location [CC] |
cc_subcellular_location |
Subcellular location |
uniprot_field |
|
Topological domain |
ft_topo_dom |
Subcellular location |
uniprot_field |
|
Transmembrane |
ft_transmem |
Subcellular location |
uniprot_field |
|
Chain |
ft_chain |
PTM / Processsing |
uniprot_field |
|
Cross-link |
ft_crosslnk |
PTM / Processsing |
uniprot_field |
|
Disulfide bond |
ft_disulfid |
PTM / Processsing |
uniprot_field |
|
Glycosylation |
ft_carbohyd |
PTM / Processsing |
uniprot_field |
|
Initiator methionine |
ft_init_met |
PTM / Processsing |
uniprot_field |
|
Lipidation |
ft_lipid |
PTM / Processsing |
uniprot_field |
|
Modified residue |
ft_mod_res |
PTM / Processsing |
uniprot_field |
|
Peptide |
ft_peptide |
PTM / Processsing |
uniprot_field |
|
Post-translational modification |
cc_ptm |
PTM / Processsing |
uniprot_field |
|
Propeptide |
ft_propep |
PTM / Processsing |
uniprot_field |
|
Signal peptide |
ft_signal |
PTM / Processsing |
uniprot_field |
|
Transit peptide |
ft_transit |
PTM / Processsing |
uniprot_field |
|
3D |
structure_3d |
Structure |
uniprot_field |
|
Beta strand |
ft_strand |
Structure |
uniprot_field |
|
Helix |
ft_helix |
Structure |
uniprot_field |
|
Turn |
ft_turn |
Structure |
uniprot_field |
|
PubMed ID |
lit_pubmed_id |
Publications |
uniprot_field |
|
Date of creation |
date_created |
Date of |
uniprot_field |
|
Date of last modification |
date_modified |
Date of |
uniprot_field |
|
Date of last sequence modification |
date_sequence_modified |
Date of |
uniprot_field |
|
Entry version |
version |
Date of |
uniprot_field |
|
Coiled coil |
ft_coiled |
Family & Domains |
uniprot_field |
|
Compositional bias |
ft_compbias |
Family & Domains |
uniprot_field |
|
Domain[CC] |
cc_domain |
Family & Domains |
uniprot_field |
|
Domain[FT] |
ft_domain |
Family & Domains |
uniprot_field |
|
Motif |
ft_motif |
Family & Domains |
uniprot_field |
|
Protein families |
protein_families |
Family & Domains |
uniprot_field |
|
Region |
ft_region |
Family & Domains |
uniprot_field |
|
Repeat |
ft_repeat |
Family & Domains |
uniprot_field |
|
Zinc finger |
ft_zn_fing |
Family & Domains |
uniprot_field |
|
CCDS |
xref_ccds |
Sequences |
no |
cross_reference |
EMBL |
xref_embl |
Sequences |
yes |
cross_reference |
PIR |
xref_pir |
Sequences |
yes |
cross_reference |
RefSeq |
xref_refseq |
Sequences |
yes |
cross_reference |
BMRB |
xref_bmrb |
3D structure |
no |
cross_reference |
EMDB |
xref_emdb |
3D structure |
no |
cross_reference |
PCDDB |
xref_pcddb |
3D structure |
no |
cross_reference |
PDB |
xref_pdb |
3D structure |
yes |
cross_reference |
PDBsum |
xref_pdbsum |
3D structure |
no |
cross_reference |
SASBDB |
xref_sasbdb |
3D structure |
no |
cross_reference |
SMR |
xref_smr |
3D structure |
no |
cross_reference |
BioGRID |
xref_biogrid |
Protein-protein interaction |
yes |
cross_reference |
ComplexPortal |
xref_corum |
Protein-protein interaction |
no |
cross_reference |
CORUM |
xref_complexportal |
Protein-protein interaction |
yes |
cross_reference |
DIP |
xref_dip |
Protein-protein interaction |
no |
cross_reference |
ELM |
xref_elm |
Protein-protein interaction |
no |
cross_reference |
IntAct |
xref_intact |
Protein-protein interaction |
yes |
cross_reference |
MINT |
xref_mint |
Protein-protein interaction |
no |
cross_reference |
STRING |
xref_string |
Protein-protein interaction |
no |
cross_reference |
BindingDB |
xref_bindingdb |
Chemistry |
no |
cross_reference |
ChEMBL |
xref_chembl |
Chemistry |
no |
cross_reference |
DrugBank |
xref_drugbank |
Chemistry |
yes |
cross_reference |
DrugCentral |
xref_drugcentral |
Chemistry |
no |
cross_reference |
GuidetoPHARMACOLOGY |
xref_guidetopharmacology |
Chemistry |
no |
cross_reference |
SwissLipids |
xref_swisslipids |
Chemistry |
no |
cross_reference |
Allergome |
xref_allergome |
Protein family/group |
yes |
cross_reference |
CAZy |
xref_cazy |
Protein family/group |
yes |
cross_reference |
CLAE |
xref_clae |
Protein family/group |
no |
cross_reference |
ESTHER |
xref_esther |
Protein family/group |
yes |
cross_reference |
IDEAL |
xref_ideal |
Protein family/group |
no |
cross_reference |
IMGT_GENE-DB |
xref_imgt_gene-db |
Protein family/group |
no |
cross_reference |
MEROPS |
xref_merops |
Protein family/group |
no |
cross_reference |
MoonDB |
xref_moondb |
Protein family/group |
yes |
cross_reference |
MoonProt |
xref_moonprot |
Protein family/group |
no |
cross_reference |
PeroxiBase |
xref_peroxibase |
Protein family/group |
yes |
cross_reference |
REBASE |
xref_rebase |
Protein family/group |
yes |
cross_reference |
TCDB |
xref_tcdb |
Protein family/group |
yes |
cross_reference |
UniLectin |
xref_unilectin |
Protein family/group |
no |
cross_reference |
CarbonylDB |
xref_carbonyldb |
PTM |
no |
cross_reference |
DEPOD |
xref_depod |
PTM |
no |
cross_reference |
GlyConnect |
xref_glyconnect |
PTM |
yes |
cross_reference |
GlyGen |
xref_glygen |
PTM |
yes |
cross_reference |
iPTMnet |
xref_iptmnet |
PTM |
no |
cross_reference |
MetOSite |
xref_metosite |
PTM |
no |
cross_reference |
PhosphoSitePlus |
xref_phosphositeplus |
PTM |
no |
cross_reference |
SwissPalm |
xref_swisspalm |
PTM |
no |
cross_reference |
UniCarbKB |
xref_unicarbkb |
PTM |
no |
cross_reference |
BioMuta |
xref_biomuta |
Genetic variation/Polymorphism and mutation |
no |
cross_reference |
dbSNP |
xref_dbsnp |
Genetic variation/Polymorphism and mutation |
no |
cross_reference |
DMDM |
xref_dmdm |
Genetic variation/Polymorphism and mutation |
no |
cross_reference |
COMPLUYEAST-2DPAGE |
xref_compluyeast-2dpage |
2D gel |
no |
cross_reference |
DOSAC-COBS-2DPAGE |
xref_dosac-cobs-2dpage |
2D gel |
no |
cross_reference |
OGP |
xref_ogp |
2D gel |
no |
cross_reference |
REPRODUCTION-2DPAGE |
xref_reproduction-2dpage |
2D gel |
no |
cross_reference |
SWISS-2DPAGE |
xref_swiss-2dpage |
2D gel |
no |
cross_reference |
UCD-2DPAGE |
xref_ucd-2dpage |
2D gel |
no |
cross_reference |
World-2DPAGE |
xref_world-2dpage |
2D gel |
no |
cross_reference |
CPTAC |
xref_cptac |
Proteomic |
no |
cross_reference |
EPD |
xref_epd |
Proteomic |
no |
cross_reference |
jPOST |
xref_massive |
Proteomic |
no |
cross_reference |
MassIVE |
xref_maxqb |
Proteomic |
no |
cross_reference |
MaxQB |
xref_pride |
Proteomic |
no |
cross_reference |
PaxDb |
xref_paxdb |
Proteomic |
no |
cross_reference |
PeptideAtlas |
xref_peptideatlas |
Proteomic |
no |
cross_reference |
PRIDE |
xref_promex |
Proteomic |
no |
cross_reference |
ProMEX |
xref_proteomicsdb |
Proteomic |
no |
cross_reference |
ProteomicsDB |
xref_topdownproteomics |
Proteomic |
no |
cross_reference |
TopDownProteomics |
xref_jpost |
Proteomic |
no |
cross_reference |
ABCD |
xref_abcd |
Protocols and materials |
yes |
cross_reference |
Antibodypedia |
xref_antibodypedia |
Protocols and materials |
yes |
cross_reference |
CPTC |
xref_cptc |
Protocols and materials |
yes |
cross_reference |
DNASU |
xref_dnasu |
Protocols and materials |
no |
cross_reference |
Ensembl |
xref_ensembl |
Genome annotation |
yes |
cross_reference |
EnsemblBacteria |
xref_ensemblbacteria |
Genome annotation |
yes |
cross_reference |
EnsemblFungi |
xref_ensemblfungi |
Genome annotation |
yes |
cross_reference |
EnsemblMetazoa |
xref_ensemblmetazoa |
Genome annotation |
yes |
cross_reference |
EnsemblPlants |
xref_ensemblplants |
Genome annotation |
yes |
cross_reference |
EnsemblProtists |
xref_ensemblprotists |
Genome annotation |
yes |
cross_reference |
GeneDB |
xref_genedb |
Genome annotation |
no |
cross_reference |
GeneID |
xref_geneid |
Genome annotation |
no |
cross_reference |
Gramene |
xref_gramene |
Genome annotation |
yes |
cross_reference |
KEGG |
xref_kegg |
Genome annotation |
no |
cross_reference |
PATRIC |
xref_patric |
Genome annotation |
yes |
cross_reference |
UCSC |
xref_ucsc |
Genome annotation |
yes |
cross_reference |
VectorBase |
xref_vectorbase |
Genome annotation |
yes |
cross_reference |
WBParaSite |
xref_wbparasite |
Genome annotation |
yes |
cross_reference |
ArachnoServer |
xref_arachnoserver |
Organism-specific |
yes |
cross_reference |
Araport |
xref_araport |
Organism-specific |
no |
cross_reference |
CGD |
xref_cgd |
Organism-specific |
yes |
cross_reference |
ConoServer |
xref_conoserver |
Organism-specific |
yes |
cross_reference |
CTD |
xref_ctd |
Organism-specific |
no |
cross_reference |
dictyBase |
xref_dictybase |
Organism-specific |
yes |
cross_reference |
DisGeNET |
xref_disgenet |
Organism-specific |
no |
cross_reference |
EchoBASE |
xref_echobase |
Organism-specific |
no |
cross_reference |
euHCVdb |
xref_euhcvdb |
Organism-specific |
no |
cross_reference |
FlyBase |
xref_flybase |
Organism-specific |
yes |
cross_reference |
GeneCards |
xref_genecards |
Organism-specific |
no |
cross_reference |
GeneReviews |
xref_genereviews |
Organism-specific |
no |
cross_reference |
HGNC |
xref_hgnc |
Organism-specific |
yes |
cross_reference |
HPA |
xref_hpa |
Organism-specific |
yes |
cross_reference |
JaponicusDB |
xref_japonicus_db |
Organism-specific |
yes |
cross_reference |
LegioList |
xref_legiolist |
Organism-specific |
no |
cross_reference |
Leproma |
xref_leproma |
Organism-specific |
no |
cross_reference |
MaizeGDB |
xref_maizegdb |
Organism-specific |
no |
cross_reference |
MalaCards |
xref_malacards |
Organism-specific |
no |
cross_reference |
MGI |
xref_mgi |
Organism-specific |
yes |
cross_reference |
MIM |
xref_mim |
Organism-specific |
yes |
cross_reference |
neXtProt |
xref_nextprot |
Organism-specific |
no |
cross_reference |
NIAGADS |
xref_niagads |
Organism-specific |
no |
cross_reference |
OpenTargets |
xref_opentargets |
Organism-specific |
no |
cross_reference |
Orphanet |
xref_orphanet |
Organism-specific |
yes |
cross_reference |
PharmGKB |
xref_pharmgkb |
Organism-specific |
no |
cross_reference |
PHI-base |
xref_phi-base |
Organism-specific |
no |
cross_reference |
PomBase |
xref_pombase |
Organism-specific |
no |
cross_reference |
PseudoCAP |
xref_pseudocap |
Organism-specific |
no |
cross_reference |
RGD |
xref_rgd |
Organism-specific |
yes |
cross_reference |
SGD |
xref_sgd |
Organism-specific |
yes |
cross_reference |
TAIR |
xref_tair |
Organism-specific |
yes |
cross_reference |
TubercuList |
xref_tuberculist |
Organism-specific |
no |
cross_reference |
VEuPathDB |
xref_veupathdb |
Organism-specific |
no |
cross_reference |
VGNC |
xref_vgnc |
Organism-specific |
yes |
cross_reference |
WormBase |
xref_wormbase |
Organism-specific |
yes |
cross_reference |
Xenbase |
xref_xenbase |
Organism-specific |
yes |
cross_reference |
ZFIN |
xref_zfin |
Organism-specific |
yes |
cross_reference |
eggNOG |
xref_eggnog |
Phylogenomic |
yes |
cross_reference |
GeneTree |
xref_genetree |
Phylogenomic |
no |
cross_reference |
HOGENOM |
xref_hogenom |
Phylogenomic |
no |
cross_reference |
InParanoid |
xref_inparanoid |
Phylogenomic |
no |
cross_reference |
KO |
xref_ko |
Phylogenomic |
no |
cross_reference |
OMA |
xref_oma |
Phylogenomic |
yes |
cross_reference |
OrthoDB |
xref_orthodb |
Phylogenomic |
no |
cross_reference |
PhylomeDB |
xref_phylomedb |
Phylogenomic |
no |
cross_reference |
TreeFam |
xref_treefam |
Phylogenomic |
no |
cross_reference |
BioCyc |
xref_biocyc |
Enzyme and pathway |
no |
cross_reference |
BRENDA |
xref_brenda |
Enzyme and pathway |
yes |
cross_reference |
PathwayCommons |
xref_pathwaycommons |
Enzyme and pathway |
no |
cross_reference |
PlantReactome |
xref_plantreactome |
Enzyme and pathway |
yes |
cross_reference |
Reactome |
xref_reactome |
Enzyme and pathway |
no |
cross_reference |
SABIO-RK |
xref_sabio-rk |
Enzyme and pathway |
no |
cross_reference |
SignaLink |
xref_signalink |
Enzyme and pathway |
no |
cross_reference |
SIGNOR |
xref_signor |
Enzyme and pathway |
no |
cross_reference |
UniPathway |
xref_unipathway |
Enzyme and pathway |
yes |
cross_reference |
BioGRID-ORCS |
xref_biogrid-orcs |
Miscellaneous |
yes |
cross_reference |
ChiTaRS |
xref_chitars |
Miscellaneous |
yes |
cross_reference |
EvolutionaryTrace |
xref_evolutionarytrace |
Miscellaneous |
no |
cross_reference |
GeneWiki |
xref_genewiki |
Miscellaneous |
no |
cross_reference |
GenomeRNAi |
xref_genomernai |
Miscellaneous |
no |
cross_reference |
Pharos |
xref_pharos |
Miscellaneous |
no |
cross_reference |
PRO |
xref_pro |
Miscellaneous |
no |
cross_reference |
RNAct |
xref_rnact |
Miscellaneous |
yes |
cross_reference |
Bgee |
xref_bgee |
Gene expression |
yes |
cross_reference |
CollecTF |
xref_collectf |
Gene expression |
no |
cross_reference |
ExpressionAtlas |
xref_expressionatlas |
Gene expression |
yes |
cross_reference |
Genevisible |
xref_genevisible |
Gene expression |
yes |
cross_reference |
CleanEx |
xref_cleanex |
Gene expression |
no |
cross_reference |
CDD |
xref_cdd |
Family and domain |
yes |
cross_reference |
DisProt |
xref_disprot |
Family and domain |
no |
cross_reference |
Gene3D |
xref_gene3d |
Family and domain |
yes |
cross_reference |
HAMAP |
xref_hamap |
Family and domain |
yes |
cross_reference |
InterPro |
xref_interpro |
Family and domain |
yes |
cross_reference |
NCBIfam |
xref_ncbifam |
Family and domain |
yes |
cross_reference |
PANTHER |
xref_panther |
Family and domain |
yes |
cross_reference |
Pfam |
xref_pfam |
Family and domain |
yes |
cross_reference |
PIRSF |
xref_pirsf |
Family and domain |
yes |
cross_reference |
PRINTS |
xref_prints |
Family and domain |
yes |
cross_reference |
PROSITE |
xref_prosite |
Family and domain |
yes |
cross_reference |
SFLD |
xref_sfld |
Family and domain |
yes |
cross_reference |
SMART |
xref_smart |
Family and domain |
yes |
cross_reference |
SUPFAM |
xref_supfam |
Family and domain |
yes |
cross_reference |
Specify Return Fields with ID Mapping API
Specify which fields to retrieve on a ID mapping request:
from UniProtMapper import ProtMapper
mapper = ProtMapper()
fields = ["accession", "gene_names", "organism_name"]
result, failed = mapper.get(
["P30542"],
fields=fields,
)
Specify Return Fields with UniProtKB API
Specify which fields to retrieve on a field-based query:
from UniProtMapper import ProtKB
from UniProtMapper.uniprotkb_fields import accession
protkb = ProtKB()
query = accession("P30542")
fields = ["accession", "gene_names", "organism_name"]
result, failed = protkb.get(
query,
fields=fields,
)